Publications

Scientific papers on application cases for LemnaTec technologies

Applications of LemnaTec hard- and software in plant phenotyping, seedling assessments, ecotoxicology, and more are reported in hundreds of publications. Scientific papers describe application cases for imaging and image processing with many plant species, but also with non-plant organisms.

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  • Genze, Nikita; Vahl, Wouter K.; Groth, Jennifer; Wirth, Maximilian; Grieb, Michael; Grimm, Dominik G. (2024)
    Manually annotated and curated Dataset of diverse Weed Species in Maize and Sorghum for Computer Vision
    Scientific Data - 11(1) 109, DOI: 10.1038/s41597-024-02945-6

  • Jin, Hongyu; Park, Alexa; Sreedasyam, Avinash; Li, Guangyong; Ge, Yufeng; Swaminathan, Kankshita; Schmutz, Jeremy; Clemente, Thomas E.; Schnable, James C.; Yang, Jinliang (2024)
    Nitrogen response and growth trajectory of sorghum CRISPR-Cas9 mutants using high-throughput phenotyping
    - () , DOI: 10.1101/2024.12.13.624727

  • Qi, Mingsheng; Berry, Jeffrey C.; Veley, Kira W.; O'Connor, Lily; Finkel, Omri M.; Salas-González, Isai; Kuhs, Molly; Jupe, Julietta; Holcomb, Emily; Del Glavina Rio, Tijana; Creech, Cody; Liu, Peng; Tringe, Susannah G.; Dangl, Jeffery L.; Schachtman, Daniel P.; Bart, Rebecca S. (2022)
    Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons
    ISME J (The ISME Journal) - () 1–13, DOI: 10.1038/s41396-022-01245-4

  • Zhang, Huichun; Ge, Yufeng; Xie, Xinyan; Atefi, Abbas; Wijewardane, Nuwan K.; Thapa, Suresh (2022)
    High throughput analysis of leaf chlorophyll content in sorghum using RGB, hyperspectral, and fluorescence imaging and sensor fusion
    Plant Methods (Plant Methods) - 18(1) 60, DOI: 10.1186/s13007-022-00892-0

  • Miao, Chenyong; Guo, Alice; Thompson, Addie M.; Yang, Jinliang; Ge, Yufeng; Schnable, James C. (2021)
    Automation of leaf counting in maize and sorghum using deep learning
    Plant phenome j. (The Plant Phenome Journal) - () , DOI: 10.1002/ppj2.20022

  • Saluja, Manny; Zhu, Feiyu; Yu, Hongfeng; Walia, Harkamal; Sattler, Scott E. (2021)
    Loss of COMT activity reduces lateral root formation and alters the response to water limitation in sorghum brown midrib (bmr) 12 mutant
    New Phytol (New Phytologist) - 229(5) 2780–2794, DOI: 10.1111/nph.17051

  • Watts‐Williams, Stephanie J.; Gill, Alison R.; Jewell, Nathaniel; Brien, Christopher J.; Berger, Bettina; Tran, Binh T. T.; Mace, Emma; Cruickshank, Alan W.; Jordan, David R.; Garnett, Trevor; Cavagnaro, Timothy R. (2021)
    Enhancement of sorghum grain yield and nutrition: A role for arbuscular mycorrhizal fungi regardless of soil phosphorus availability
    Plants People Planet (PLANTS, PEOPLE, PLANET) - () , DOI: 10.1002/ppp3.10224

  • Zhang, Huichun (2021)
    Estimation of the chlorophyll concentration in sorghum using three high throughput phenotyping imaging techniques
    - () , DOI:

  • Kenchanmane Raju, Sunil K.; Adkins, Miles; Enersen, Alex; Santana de Carvalho, Daniel; Studer, Anthony J.; Ganapathysubramanian, Baskar; Schnable, Patrick S.; Schnable, James C. (2020)
    Leaf Angle eXtractor: A high-throughput image processing framework for leaf angle measurements in maize and sorghum
    Applications in plant sciences - 8(8) e11385, DOI: 10.1002/aps3.11385

  • Zhu, Feiyu; Saluja, Manny; Singh, Jaspinder; Paul, Puneet; Sattler, Scott E.; Staswick, Paul; Walia, Harkamal; Yu, Hongfeng (2020)
    PhenoImage : an open-source GUI for plant image analysis
    - () , DOI: 10.1101/2020.09.01.278234